Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPTECKVETKLAGNACLAVLYG-KSPSADCCQRVRVTHVECVCPYVS-PKVASIIRAYGLNKLIKKIEGCGRAVPHNLKCGSITIP
1N89 Chain:A ((7-65))
--------------LAVCASAILSGAKPSGECCGNLRAQQ-GCFCQYAKDPTYGQY---IRSPHARDTLTSCGLAVP-----------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25673 for 346 contacts (-74.2/contact) +
2D Compatibility (PS) -5933 + (NN) -1210 + (LL) 1992
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -35174.0 ( -101.66 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: