Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPN-RHYEAII--ACSLAMIASFLLLFAQAGGLYVVLPTLLIIG------FASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS |
| 3J5P Chain:B ((335-433)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRG-----IQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45409 for 533 contacts (-85.2/contact) +
2D Compatibility (PS) -9559 + (NN) -5259 + (LL) 16612
1D Compatibility (HY) -10000 + (ID) 1250
Total energy: -54865.0 ( -102.94 by residue)
QMean score : 0.119
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