Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILSPILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENYEIWGWRLLFYFCSIMGVIGFL-TRYIMEESLAYKT---HDQ--NKSLSNSPFLE-----LIRSYKKAFMIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVRIT-VEIT-FGTSAVLFAILSDKVGRKNVMVLILIALACAG--LPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVCELLPTKVRCTGFSLAHNISAGIFG-GISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 1PW4 Chain:A ((41-412)) | --YYLVRKNFALAMPYLVE-QGFS-RGDLGFAL-----SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT----SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGM------AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND-----TAKQIFMQYVLP-NKLLWYI-AIANVFVYLLRYGILD-WSPTYLKEV-KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGY-LGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289378 for 2793 contacts (-103.6/contact) +
2D Compatibility (PS) -34501 + (NN) -1372 + (LL) 1624
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -337077.0 ( -120.69 by residue)
QMean score : 0.200
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