Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNND------KDFFCKISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEERSILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIE-QGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFSRKSVDKGFSRITYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKSNIERGM-VVRAIPAPKTAEEPRSFFDKKIEHTQKEFGAKGLGY----ITFNKDGTAKGPIAKF-LDDNRLNHIREATNIKPGDSVFFASDKENEAATIAGKVRTLLGSEL---GLI--DNNIFKFCWVVDFPYFV-YDDKSKKIDFFHNPFSMPHGGLKDLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALVRAFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLRELSLKVVE |
| 4AH6 Chain:A ((50-630)) | ----RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKILCEAPV---ESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNAC------------KKLPFEIKNFVKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIEGLLQYSWPN-DKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAK----YLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIR-LMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILAT--LLKEDV-KMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201143 for 4273 contacts (-47.1/contact) +
2D Compatibility (PS) -59751 + (NN) -27281 + (LL) 2152
1D Compatibility (HY) -46000 + (ID) 10350
Total energy: -342373.0 ( -80.12 by residue)
QMean score : 0.420
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