Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
1RW2 Chain:A ((100-123))
-----------------------------------------------------------------------FLKALQEKV-EIKQLNHFWEIVVQDGITLITKEEASGS
General information:
TITO was launched using:
RESULT:
Template:
1RW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6524 for 104 contacts (-62.7/contact) +
2D Compatibility (PS) -2715 + (NN) -1713 + (LL) 5076
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -9326.0 ( -89.67 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1RW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RW2-query.scw
PDB file :
Tito_Scwrl_1RW2.pdb
: