Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLPILQVIIPIIASMLCFFTRKHKVSWFISFTTTIVTLFISSVLLIKTYNGETITYHLGNWAPPYGIELRIDVLNSLILTLVNFVALISVLYSFYINEKEISKNKITGLYSLFLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGKDKKALVAAFEYLISGTIGATFYLLGIGLLYSTTGTLNMSDMAERIVPLYNNNIVKLGTLFIFVGLSNKMALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSIIKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLTNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYSNPIRLVVEKLVF |
2P08 Chain:A ((9-21)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAFPFHFAFSRNREIVQTGEVLERISPEPLVGKLIEQHFQINRPKILIDFDAISKQPRALFILEFLHNGMQLKGQMMYQPEEEVIFFLGSPWITDTTSL----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -885 for 30 contacts (-29.5/contact) +
2D Compatibility (PS) -1388 + (NN) -96 + (LL) 34160
1D Compatibility (HY) 400 + (ID) 100
Total energy: 32091.0 ( 1069.70 by residue)
QMean score : -0.380
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