Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
1PWP Chain:A ((30-62))
-----------------------------KTQEEHLKEIMKHIVKIEVKGEEAVKKEAAEKLLE
General information:
TITO was launched using:
RESULT:
Template:
1PWP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9470 for 139 contacts (68.1/contact) +
2D Compatibility (PS) -3539 + (NN) -614 + (LL) 2848
1D Compatibility (HY) -1600 + (ID) 500
Total energy: 6065.0 ( 43.63 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_1PWP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PWP-query.scw
PDB file :
Tito_Scwrl_1PWP.pdb
: