Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAIDNVLYAI--NETMVMWKKELKSL------VKGNPTIFNDKLAISTL------DDCLYMLDMRMIVQSGPIISPVIMIVTK
1KB0 Chain:A ((124-198))
---VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKP
General information:
TITO was launched using:
RESULT:
Template:
1KB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45284 for 383 contacts (-118.2/contact) +
2D Compatibility (PS) -6021 + (NN) 5827 + (LL) 180
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -47048.0 ( -122.84 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_1KB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KB0-query.scw
PDB file :
Tito_Scwrl_1KB0.pdb
: