Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVFALVISSQIGSGIFMLPISLA-PYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGPTA-AFFVGWTYWVISWVSTTALIVVGVGYLTPFLHEEIKNI-HLFLELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIMGLINGNDLA-NSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERN--YHKLLTGSIATTFCCWVILETSI---NTLLIASLFTTSGIPLYLFWYRRASAQ |
| 3GIA Chain:A ((4-424)) | KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAP---SAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKST-EGLYITSALGVLFALLF-------NMEGVASITSAVFMVIY-LFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -443423 for 3799 contacts (-116.7/contact) +
2D Compatibility (PS) -41505 + (NN) -4458 + (LL) 556
1D Compatibility (HY) -32800 + (ID) 3950
Total energy: -525580.0 ( -138.35 by residue)
QMean score : 0.358
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