Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQG-----SRI---IPIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPG---TGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIFGIVENMSYFIQDNSKIYIFGKDGTKVMSEE-LGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
1HYQ Chain:A ((5-214)) | -------------------------------------------------------------------------------------------------ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKA---NPEKLEDVLTQIM--ESTDI--LLLDAPAGLERSAVIAIAAAQEL-----LLVVNPEISSITDGLKTKIVAERLGTKVLGVVVN---------RITTLGIEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149247 for 1638 contacts (-91.1/contact) +
2D Compatibility (PS) -21535 + (NN) -10461 + (LL) 8368
1D Compatibility (HY) -10800 + (ID) 3250
Total energy: -186925.0 ( -114.12 by residue)
QMean score : 0.475
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