Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDAVKVIAEELKGYIERIEKLEQEKKNVQDQIHDVYAKAA-DKGWNIKVMKQIIRLRKMEDGDRAEQEILLNTYKRALGMSCEEN
4N05 Chain:B ((25-51))
-------------------ESLIQLSERIAENVHEVWAKAAIDEGWTYGEKRDDIHKKHPCLVPYDELPEEEKEYDRNTAMNTIKM
General information:
TITO was launched using:
RESULT:
Template:
4N05.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1491 for 95 contacts (15.7/contact) +
2D Compatibility (PS) -2712 + (NN) -574 + (LL) 1880
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -2915.0 ( -30.68 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_4N05.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N05-query.scw
PDB file :
Tito_Scwrl_4N05.pdb
: