Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRMLIEKAKKGHKFGETWEDYYRSISDNKRISIYKNV
2K5P Chain:A ((1-11))
----------------------MNLTVNGKPSTVDGAESLNVTELLSALKVAQAEYVTVELNGEVLEREAFDA
General information:
TITO was launched using:
RESULT:
Template:
2K5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1114 for 33 contacts (33.8/contact) +
2D Compatibility (PS) -1018 + (NN) 340 + (LL) 944
1D Compatibility (HY) -400 + (ID) 100
Total energy: 880.0 ( 26.67 by residue)
QMean score : -0.913
(partial model without unconserved sides chains):
PDB file :
Tito_2K5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5P-query.scw
PDB file :
Tito_Scwrl_2K5P.pdb
: