Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSRVKVNKDNKNANSGKQARFDLNRMNFMINGKIVDKEYIIRLYGENNYLIPNGSEDYRLFAKRVFTGMFEYAKAEVPNNRILEKLVINCNQAGYEFAIYE
3PQU Chain:A ((454-485))
------IAEADNNRESGYRTEFDVNFSDKKVNGKLFDKGGVNPVFTVDATINGNGFIGSAKTSDSGFALDSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHK
General information:
TITO was launched using:
RESULT:
Template:
3PQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12192 for 131 contacts (93.1/contact) +
2D Compatibility (PS) -3185 + (NN) 626 + (LL) 712
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 8595.0 ( 65.61 by residue)
QMean score : 0.111
(partial model without unconserved sides chains):
PDB file :
Tito_3PQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PQU-query.scw
PDB file :
Tito_Scwrl_3PQU.pdb
: