Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLK-DSIDPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHKL-VKIKYPDTTFILDIDVQIGLSR----AMDKNKYEEMNISFYNKVRKGFQEIAINEPDRCSIITEIEAKDNNQVHVEIVNKVTATKPVLLRK
4HEJ Chain:A ((4-177))
-FITFEGPEGSGKTT---VINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN----NRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLE-------
General information:
TITO was launched using:
RESULT:
Template:
4HEJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87649 for 1217 contacts (-72.0/contact) +
2D Compatibility (PS) -18548 + (NN) -15431 + (LL) 1540
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -136638.0 ( -112.27 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_4HEJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HEJ-query.scw
PDB file :
Tito_Scwrl_4HEJ.pdb
: