Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKVGEKDFRYDNPIVEFVNSELKISNKYNTVMRAVNLLLRHAPVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLWKIDRPI----LNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNIVLAKPKKKFLSTPEVFSKYG-GNFSKPIEWRDDTEKDLLKLLKETENDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
2V2Q Chain:A ((7-271)) | -----VLSPAKINLGLWVLGRLPSGYHEI--LTLYQEIPFYDEIYIREGVLR--------VETNIGIPQEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNEL--LGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVET-EISGKITLVIPQVSS-STGRVYSSLREEHFVTPEYAEEKIQRIISGEVEEIENVLGDIARELYPEINEVYRFVEYL--GFKPFVSGSGSTVYFFGGASEELKKAA-----KMRGWKVVELEL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134587 for 2206 contacts (-61.0/contact) +
2D Compatibility (PS) -28095 + (NN) -5625 + (LL) 2168
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -186689.0 ( -84.63 by residue)
QMean score : 0.412
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