Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLNKFTEKAKSLIQSAQMKALGTGHQVFMPEHLLKVMLEDESGLVQDLIGACGGNAQSISDAVNNAIKKFPIVKGPGSNSLQLSREVAKVFEDSIGMARRNKDSFVTVERLLQGLTAQKNDTVGKILAENGITPQKLNSVITEMRKGSSADSPNSEENLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDTVSILRGLKERYEVHHGIRITDGAIIAAAMLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEIIDELERKIVQLKIESEVLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGKLEKAGELMYGVIPHLENELMNQEKVTDSFLKKEVTEDDIANIVSKWTGIPVDNMMHSEKEKLLSMENEIGKRVIGQKDAIEAISNAVRRSRSGVQDTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGVA-----DFVKSEVMQIVKSAFRPEFLNRLDEIIIFHSLTKDDIYKIIDVQFLYLQKIIVKRKLSISLSQEAKELIAQAGYDPEYGVRPLKRVIQECIQNNLAKLVLSGEVAEGDKLIVYAFNNEILVKKV |
4FCW Chain:A ((17-296)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSHGRTVDFRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQMSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219817 for 2115 contacts (-103.9/contact) +
2D Compatibility (PS) -30128 + (NN) -16503 + (LL) 40372
1D Compatibility (HY) -33200 + (ID) 8250
Total energy: -267526.0 ( -126.49 by residue)
QMean score : 0.692
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