Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDK--LLMIDANLNVDQVKQEIESKISCSLV
2RH5 Chain:A ((1-198))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALI-EEVFPKHGNVIFDGFPRTVKQAEALDEML-EKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKY--------NPPPPGVKVIQREDDKP-EVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI-----
General information:
TITO was launched using:
RESULT:
Template:
2RH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98095 for 1379 contacts (-71.1/contact) +
2D Compatibility (PS) -21251 + (NN) -7219 + (LL) 936
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -141179.0 ( -102.38 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_2RH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RH5-query.scw
PDB file :
Tito_Scwrl_2RH5.pdb
: