Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNFQNNNDWSELLVSVRRVTTVTKGGRRFSFSILVVVGDEKGRVGCGMGKHAEVAEARIKAVNAAKKSMIRVYLREGRTLHHDIKAKFCSGEIVLRAARAGTGIIAGGAIRSVFEVLGIKDVVAKSTRSNNPHNVICAVFKAFDNMLSPRQVASKRGKKISEVVGNR
1HR0 Chain:E ((5-142))
----------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNG-TIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG---------
General information:
TITO was launched using:
RESULT:
Template:
1HR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106921 for 1105 contacts (-96.8/contact) +
2D Compatibility (PS) -14864 + (NN) -6356 + (LL) 1160
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -140681.0 ( -127.31 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1HR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HR0-query.scw
PDB file :
Tito_Scwrl_1HR0.pdb
: