Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARRNKARKRKISPDSRYDSVLLMRFINVIMKYGKKSVAEKIVYNALSSAEKEVNERGVSIFETAVENVTPSVEVRSRRIGGATYQVPVEVKKDRAVSLALRWIVKSASAMRKKSGKGFFKCLCSEILDAYNKRGGAFKMCEEKYKMAEANKAFSHLRF
1HNZ Chain:G ((2-156))
-ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAAN---QRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW
General information:
TITO was launched using:
RESULT:
Template:
1HNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82072 for 1142 contacts (-71.9/contact) +
2D Compatibility (PS) -16613 + (NN) -6574 + (LL) 660
1D Compatibility (HY) -10400 + (ID) 3450
Total energy: -118449.0 ( -103.72 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_1HNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNZ-query.scw
PDB file :
Tito_Scwrl_1HNZ.pdb
: