Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
1DN3 Chain:A ((1-15))
--------------------------------------------------------------------------------QAPAYKKAAKKLAES
General information:
TITO was launched using:
RESULT:
Template:
1DN3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3458 for 51 contacts (67.8/contact) +
2D Compatibility (PS) -1567 + (NN) 356 + (LL) 7464
1D Compatibility (HY) -800 + (ID) 250
Total energy: 8661.0 ( 169.82 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1DN3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DN3-query.scw
PDB file :
Tito_Scwrl_1DN3.pdb
: