Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKALIFTSLVVVVLIVVTFLYKNNETNDLQVVNVYSSRKEELVRTLFDEFTRNTGIKVR--YIIDDYSQLLSRMENGSGTDVFLTADAVNLILAKKRGLLSQVNSEILKRAIPEKFRDSEGYWFGLTKRTRILVYNKESVDPKDLSTYEDLANKKWKGKILVRSSTSPYNRSLIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDTNQIYAVAAGEGDIAIVNSYYFARILSSER-ENKKNVANKLGVFFPNHDSNGVMVNISGAAVTKNAKNRENAIALLEFLVSKQAQELYAKKNQEYPIIEGVEVSNILKFWGDYPQSDLPLSELEKHLFEAVMIADECKWK
1Y9U Chain:A ((8-318))--------------------------------VSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDL--KLDSFRYGDLADPKWKGKVCIRSGQHPYNTALVAAMIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFA-GGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYRKQASELVDKVGFD


General information:
TITO was launched using:
RESULT:

Template: 1Y9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157943 for 2643 contacts (-59.8/contact) +
2D Compatibility (PS) -33473 + (NN) -20838 + (LL) 3656
1D Compatibility (HY) -22000 + (ID) 5550
Total energy: -236148.0 ( -89.35 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1Y9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y9U-query.scw
PDB file : Tito_Scwrl_1Y9U.pdb: