Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTIL--FNRNNF-RLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFG-HKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRGREIGFPTINIPIEDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
| 3OP1 Chain:A ((17-300)) | ---------GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKKTAEDL-----KNYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGN------GYPTANLVLLDRTYMPADGVYVV-------------DVEIQRQKYRAM----------------------ASVGKNVTF-D--EARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNWS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165247 for 2113 contacts (-78.2/contact) +
2D Compatibility (PS) -29392 + (NN) -6719 + (LL) 4084
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -218724.0 ( -103.51 by residue)
QMean score : 0.447
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