Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSFFVFLIFFSVSALASVSDVQLKEKYRDWLVYTALEDGEKVCYIVSYPKKKSEHYTTNRKPYVMVSYVDKKADEVSVTSGFQYDKEPIVLNIDKKIKYALYIIQGDLAWTEHTKTDRDLILKMKQGLSMVVSGRIKATTIDDTYSLLGFQKAYQKMHDLCYVK |
| 2K5K Chain:A ((48-57)) | -------------------------VRFGDWEKKGIAIDF----------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 0 for 19 contacts (0.0/contact) +
2D Compatibility (PS) -913 + (NN) 1357 + (LL) 11696
1D Compatibility (HY) 400 + (ID) 100
Total energy: 12440.0 ( 654.74 by residue)
QMean score : -0.161
|
|
|