Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVALKFIAIGLSVLGILGAGLGVANIFSTMLSGLARNPESEGKMKIYVYVGAGMVEFTGLLAFVLAMLLMFVA
5BQ6 Chain:A ((4-74))
--VLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLF--
General information:
TITO was launched using:
RESULT:
Template:
5BQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37026 for 402 contacts (-92.1/contact) +
2D Compatibility (PS) -7313 + (NN) -3240 + (LL) 468
1D Compatibility (HY) -9200 + (ID) 1250
Total energy: -57561.0 ( -143.19 by residue)
QMean score : 0.104
(partial model without unconserved sides chains):
PDB file :
Tito_5BQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BQ6-query.scw
PDB file :
Tito_Scwrl_5BQ6.pdb
: