Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVLVIGSGGREHALLWTLKKSPILTELYITPGRPAMGNLGVLVN--INIQNSIDMTRFCKRENIELVIIGPEQPIIDGLADNLVAEGINVFAPSQAAAKLEASKSFTKGICKQYGIPTAKYECFVDERLAKSFVRSNKIKFP-LVVKANGIAAGKGVIVCNTENEAFSAIDSMLVEKKFGESGEEIIIEEFLVGEEVSFFALVDGLKVVTLGCAKDYKRVDENNDSRNTGGMGSYSSPSIISKDMEQKIIQRIIYPTIQALANMGTPYRGVLFAGLITCKDSPKLLEYNVRFGDPEAQSMLPRFDASCDLLELMLSVAKGKL-SAKTVELNSKATVCVVVASKGYPGDYQKGEIIKGLAKIESIPGVLVFHAGTKLDESGNWVSDGGRVLNIVGEGNTLEEAKSKVYSALNFLEWPGGFFRYDIGS |
| 2QK4 Chain:A ((26-444)) | -RVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFTKPEEACSFILSAD--FPALVVKASGL---KGVIVAKSKEEACKAVQEIMQE-------ETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNGPKVLEFNCRFGDPECQVILPLLKS--DLYEVIQSTLDGLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEAQAL-GLEVFHAGTAL-KNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKDIGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268886 for 3577 contacts (-75.2/contact) +
2D Compatibility (PS) -44821 + (NN) -24810 + (LL) 396
1D Compatibility (HY) -31600 + (ID) 8500
Total energy: -378221.0 ( -105.74 by residue)
QMean score : 0.507
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