Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDNLKQLYDEIEKLDEFKEGSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLNLVHDCELEELQNVMNTNFTANWYLLKNLDPVLKKSNSGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTKLCVNAVYSEGPV----------DSEMYKQAFPGKDISELILPNKLTDKFVELASEDCS-ISGQVLPLSKSLE |
3UF0 Chain:A ((28-266)) | ----------SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD----GGGSAEAVVADLADLEGA---ANVAEELAATRR--VDVLVNNAGIIARAP-AEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV--AAYAASKHAVVGLTRALASEWAGRGVGVNAL-APGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -164151 for 1951 contacts (-84.1/contact) +
2D Compatibility (PS) -24552 + (NN) -9456 + (LL) 2020
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -208839.0 ( -107.04 by residue)
QMean score : 0.539
|
|
|