Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALKRVGTDFVLKTKDLFTPSESQVYVKDLRKVMIYKDGRKCRYPKNYDQVVESGKVIENKDMHGNSVLDKDRNPTYRLLYGNKNKDGWPIFELTKIMEIGDKSYFTIKFLVDKGKVSKGKCDNNDYHSFYKPFGFLKIDLEKYLPVFEAQKTKKSTCSFEFTNSSVPTKKTKNKKSNEVKEIVDEKERNGELLYTSDYKKLSTSFFEIRDQSNNLELGKSIISVPIVFAAGLAKICAKLLTYIPMELGEYLIGKQSLIAKFFGYFFLFTPAVAVKNSVNMLATLLKLPICAFVANKEEYGDAYWTMWKYQLKECWQEAKNDYSVIKDGKRSELKKKDYPKREVAGTWKELDAKRSIIEEELEGRLSKGDENMTDSGKQEKDLEQDTTQPRTLIQRKIDYVSKLNEERDQDKCVSQIHN |
2Z6D Chain:A ((51-122)) | ----------------------------------------GRNCRFLQGPD--TDKNEVAKIRDCVKNG-----KSYCGRLL--NYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13883 for 403 contacts (34.4/contact) +
2D Compatibility (PS) -7305 + (NN) -370 + (LL) 23976
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: 26484.0 ( 65.72 by residue)
QMean score : 0.203
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