Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDRPLSPHLQIYKVQVTNFFSIMHRLTGILL-------FLLLVMLSWYFTLHVYFPELFIVKCLNVLLSTFIAKLVCILCFISFSYHFLNGIRHLLWDAGFNLEITDVLKSAMLLTVMLILSTMAFLFVFI
3AE2 Chain:C ((20-136))
--NRPLSPHITIYRWSLPMAMSICHRGTGIALSAGVSLFGLSALLLPGNFESHL---ELVKSLCLGPTL-IYTAKFGIVFPLM---YHTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSSVGLAAM--
General information:
TITO was launched using:
RESULT:
Template:
3AE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74779 for 586 contacts (-127.6/contact) +
2D Compatibility (PS) -11447 + (NN) -8122 + (LL) 852
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -106046.0 ( -180.97 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3AE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AE2-query.scw
PDB file :
Tito_Scwrl_3AE2.pdb
: