Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGYTDEQITSE-LRNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
4BQO Chain:A ((11-85))
-------------YGSCQAPALAKMLNSCPTFARDWELVEMEPCFVASEEQIDRHLAETIPKLDLFLYQPVSEGYRGEKYSSVFLRNSMPPGGNALSVQYMHWEGYHPTVNSPYGLPPHPEGYVDA
General information:
TITO was launched using:
RESULT:
Template:
4BQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13714 for 462 contacts (-29.7/contact) +
2D Compatibility (PS) -7642 + (NN) 518 + (LL) 2028
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -23860.0 ( -51.65 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_4BQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BQO-query.scw
PDB file :
Tito_Scwrl_4BQO.pdb
: