Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNTDQQQGLDSKEKSSEDLKPEKKR---EMKEAAAELKEGIKKSGA-------GNQSVGTEVSNQATTQDIDNSKTMEH
2IRU Chain:A ((140-187))
------------------DLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKR
General information:
TITO was launched using:
RESULT:
Template:
2IRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5000 for 163 contacts (30.7/contact) +
2D Compatibility (PS) -4397 + (NN) -3815 + (LL) 744
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -4418.0 ( -27.10 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_2IRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IRU-query.scw
PDB file :
Tito_Scwrl_2IRU.pdb
: