Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILKNN-----IKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTME-----IRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
4EGJ Chain:A ((12-311)) | ------------------VAVLLGGNSAEREVSLNSGRLVLQGLRDAGIDAHPFDPAERPLAALKEEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQLGIPTPPFEAVLRGDDYEARAKEIVAKLGLPLFVKPAS--------IKVKSADALPAALI--------------EAVKFDR-IVVVEKSIEGGGEYTACI----AGNLDLPVIRIVP----------------QYLIPCGLTADEEARLKVLARRAFDVLGCTDWGRADFMLDADGNPY-FLEVNTAPGMTDHSLPPKAARAV-GISYQELVVAVLALTL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140388 for 2182 contacts (-64.3/contact) +
2D Compatibility (PS) -29086 + (NN) -15408 + (LL) 6144
1D Compatibility (HY) -15200 + (ID) 4700
Total energy: -198638.0 ( -91.03 by residue)
QMean score : 0.437
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