Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYILASLSLPFFITENYLLITALVPLLSAVVILFTGKWPTVSNGITVASSVLLFVYTCLCTLYWAYGDHSQFILINFGNNLHVSLKLESTGVVFSLLISFLWILTSIYTIYYMQNNYPDSNYSDFLCFLLVSISCTMFIAFSGDLLTTFVFYELLTISTYPLVTYNATNESTIAGRYYFGVLFFSSLVLFFPVLGLLYNEFHTLDFVSSGIFEFDTSLVTFTAVCFTMLIYGLGKAALMPMHFWLPRAMVAPTPVSALLHAVAVVKSGAFIIVKVILYTFGIDNLQRFAQQNWFAG--GWLPYAAGFTIIAASLIALKQKELKR--LLAYSTVSQLSYIILFASIFSDLSARVAIFQLVCHAFAKITLFFIAGSIITKTGEKYIDRIHGIGRSMPVTMVAFAIGALSMIGVPPASTFWGKFLIFQAVFNSGNIALSVFVTLVLTVGTVLNAMYFLPIIYNAFFSKSSKNFFIKKIPVFLILPPVITAICTFIIFLVTPFILPLC |
| 4ELR Chain:A ((142-196)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLPRFAREKGLVGRVGWTPTYSSFQDMVAGMIALYGEEKTREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKSPKLDLEKLPLDRALRLLRETGVL-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ELR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7791 for 252 contacts (-30.9/contact) +
2D Compatibility (PS) -5608 + (NN) -2574 + (LL) 27956
1D Compatibility (HY) -3200 + (ID) 950
Total energy: 7833.0 ( 31.08 by residue)
QMean score : 0.124
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