Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFVNGGQLKKINQKWLIIGTGLLLFMMMLPSIILLAKMTIGLVMVLVVAIAIKIASKTISNVLEDKQADPNQLTSQTTQSRIINLAVGLVSIFTGGLSLLIIAKTGIAVICAAVVTLAIYEYAKDYKYAEDKEIGKSINDKLDEIAKNTTNFIVSGIEKLVSPQEQQV |
| 3PMD Chain:A ((113-148)) | -----------------------------------------------------------------------------------------------------------------------------------KVVIEQINLFFDHLIYSTIYSYYKLKKEYIHSYYELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2455 for 132 contacts (18.6/contact) +
2D Compatibility (PS) -3568 + (NN) 37 + (LL) 12560
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 8834.0 ( 66.92 by residue)
QMean score : 0.422
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