Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARVKRGVTTHARHKKILNLAKGYRGRAKSCYRIALQRVEKALQYAYRDRRNRKRDFRSLWIIRINAAAREHGLTYGRFMHGLALAGVDLNRKILAEMAVNYKDDFTKLAETVSSKLAENS
2ZJQ Chain:N ((2-111))
-PRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFINGLKRANIDLNRKVLADIAAREPEAFKALVDASRNARQ---
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29480 for 646 contacts (-45.6/contact) +
2D Compatibility (PS) -11788 + (NN) -1605 + (LL) 424
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -51999.0 ( -80.49 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: