Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTFQPKNLIRKRRHGFRSRMATRAGRKILNRRRSLGCKKLCA
1FFK Chain:I ((42-70))
-----RPTRLDRARALGYKA----KKGIIVVRVRIRRGGRRATR
General information:
TITO was launched using:
RESULT:
Template:
1FFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 107375 for 325 contacts (330.4/contact) +
2D Compatibility (PS) -2719 + (NN) -915 + (LL) 1060
1D Compatibility (HY) 400 + (ID) 300
Total energy: 104901.0 ( 322.77 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1FFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FFK-query.scw
PDB file :
Tito_Scwrl_1FFK.pdb
: