Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
5BNY Chain:B ((94-126))
------------------YNAELLVLLENERTLDLHDANVKNLHEKVRSQLRDNANDLGNGCFEFWHKCNNEC
General information:
TITO was launched using:
RESULT:
Template:
5BNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2838 for 125 contacts (22.7/contact) +
2D Compatibility (PS) -3963 + (NN) -5096 + (LL) 1704
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -8367.0 ( -66.94 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_5BNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BNY-query.scw
PDB file :
Tito_Scwrl_5BNY.pdb
: