Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGDWEAVIGLEVHAQVSSKTKLFSSSSTEFGAEHNTQVSLVDAAMPGTLPILNYYSIEQAIRTGLALSAEINKSSYFDRKNYFYPDLPQGYQITQFFEPIVKNGRIFI--NNNKKEVRIARIHLEQDAGKSIHEESKTYVDLNRAGVALMEIVSEPDLRSSEEAAEFMKKLRQILRYIGSCDGDMEKGSLRCDANVSVRPKGSSTFGTRCEIKNLNSICYIMQAIDYEIQRQIEILESGEKISQDTLLFDVSLGKTKVMRNKEDASDYRYFPEPDLLPVEISQDKIDSIRSSLPELPDQKKLRYIRELSINKYDADVITSDKAIANYFEELIKK-HDSKLAVTWLTVELFGRLNKAGIDIVSSPIKANALSELLDFIVDGTISARLGKQVFDIMFETGKPASLIIKEQDLKQITDKGQISEIIDKIINDNQDKVQEYQNGKTKLYGFFVGEVMKLTKGKASPDVVNFILSEKLSS |
| 3IP4 Chain:B ((3-472)) | -----FETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214273 for 3687 contacts (-58.1/contact) +
2D Compatibility (PS) -50370 + (NN) -15731 + (LL) 76
1D Compatibility (HY) -36400 + (ID) 10400
Total energy: -327098.0 ( -88.72 by residue)
QMean score : 0.505
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