Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAYTTSTHDHILKPFDVSNLESSDVIFYIDDNLETFIKPF----AKDKKELVQLSKTINLLPARSHSFSKQITHTQDEK--DLHIWLSPENAKSMILSISEALSNIDKENASRYNYNAIKAKKKINQEAEKIAKELNDFKNQKYIVTHDAYQYFEKYFGLNHPSVILSIEEDSYIGMKSLMKLKKVMEEENIKCIFSHSLEDSIKPKVL-----SNDAKMIILDPIGSNIEPGKDAYLAIINDITQNFKSCFAGYQ |
| 3GI1 Chain:A ((54-260)) | ----------------DVAAIYDADLFVYHSHTLEAWARDLDPNLKKSKVDVFEASKPLTLDRVK---------------LYDPHTWTDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLG-ISGISP---PSPRQLKEIQDFVKEYNVKTIFA---EDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKTYLENLRANLEVLYQQLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57719 for 1210 contacts (-47.7/contact) +
2D Compatibility (PS) -19228 + (NN) -7001 + (LL) 2332
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -92516.0 ( -76.46 by residue)
QMean score : 0.595
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