Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
1J5E Chain:T ((21-94))
---------------KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
1J5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9368 for 504 contacts (-18.6/contact) +
2D Compatibility (PS) -7919 + (NN) -3667 + (LL) 1636
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -20818.0 ( -41.31 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1J5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J5E-query.scw
PDB file :
Tito_Scwrl_1J5E.pdb
: