Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYK---WDGKKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLP----TERLVEQTYKT--RAREVGR--EKFIEMCHEVIEKSK---QEFKELLRSVGISYDWSLEYHTIS--KETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLN--TITFSTEENEQI---DIATTRPELFLACVAVFCHP--------------------------------------EDARYAHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELD----------IYWQQKHNLPMKII---IDQDGKINLDSMYDNNR-SQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIK--TLDQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFP-----------------VWYS-----RRKGEEGKVILAEVEDLPVDPLKDLPKGYSKEEVVPDQDVMDTWATSAITPQLSALAVNSE-FSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILK--AYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTANSRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1WKB Chain:A ((5-809)) | ------NFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLSFQDREIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIVFPAVEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFK----VPPYE--------------GKPVQEVKEAIAKEMLEKGIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFIDYGNPEWKEKARKALERMKILPETRRAQFEAIIDWLDKKAC-ARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQEGK----------LDPEKLTPEFF-------DYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWP-KGIAVNGFGTLEG-QKMSKSKGNVLNFIDAIEENGADVVRLYIM-SLAEHDSDFDWRRKEVGK-LRKQIERFYELISQFAE--YEVKGNVELKDIDRWMLHRLNKAIKETTNALEEF---RTRTAVQWAFYSIMND-------LRWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHICEELWEKLG----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260091 for 5268 contacts (-49.4/contact) +
2D Compatibility (PS) -72447 + (NN) -14920 + (LL) 12604
1D Compatibility (HY) -27200 + (ID) 9500
Total energy: -371554.0 ( -70.53 by residue)
QMean score : 0.316
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