Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTD-ETFGVAITPYLKGE-AINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVM--MLSLSMFMPSYLAILIAATISAALGVMMER
2HXW Chain:A ((2-232))
DVNLYGPGGPHTALKDIANKYSEKTGVKVNVNF--GPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREAIILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNFRNNIVAFVPNSGSALFA--QDQADAWITWIDWSKSN----PDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSKEAKEIFKKYGWREH-
General information:
TITO was launched using:
RESULT:
Template:
2HXW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -267508 for 1823 contacts (-146.7/contact) +
2D Compatibility (PS) -23304 + (NN) -1308 + (LL) 1388
1D Compatibility (HY) 4000 + (ID) 850
Total energy: -287582.0 ( -157.75 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_2HXW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HXW-query.scw
PDB file :
Tito_Scwrl_2HXW.pdb
: