Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVYDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI
4PZC Chain:A ((54-101))
---------------------IKKEKLTEADKASALARIKGSTSYDDLKATDIVIEAATENYDLKVKIL----------
General information:
TITO was launched using:
RESULT:
Template:
4PZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6905 for 184 contacts (37.5/contact) +
2D Compatibility (PS) -4690 + (NN) 713 + (LL) 2144
1D Compatibility (HY) -1600 + (ID) 850
Total energy: 2622.0 ( 14.25 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_4PZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PZC-query.scw
PDB file :
Tito_Scwrl_4PZC.pdb
: