Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------MLVCMCFKV------------LKTLKIGCTEKPHLLKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8742 for 117 contacts (-74.7/contact) +
2D Compatibility (PS) -2681 + (NN) 2367 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 400
Total energy: -13856.0 ( -118.43 by residue)
QMean score : 0.387
|
|
|