Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQH-IKPLGILHPNTSLK-----DQWWDERDFAVIDPDNNLISFFQQIKS
1JIE Chain:A ((4-118))
FLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHI---------SRTE--------HQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHF------
General information:
TITO was launched using:
RESULT:
Template:
1JIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61428 for 749 contacts (-82.0/contact) +
2D Compatibility (PS) -11572 + (NN) -2713 + (LL) 1128
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -80585.0 ( -107.59 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1JIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JIE-query.scw
PDB file :
Tito_Scwrl_1JIE.pdb
: