Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRD------------LTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDE-------FNY-----KNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVK-DETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
| 4YSK Chain:A ((12-247)) | -----FYDEATSTISYLVMDRETRQCALIDSVLDYDPKSGRTCSASADRLVERVNELNASVRWVLETHVHADHLSAAAYLKEKLGGHTAIGAHITQVQKVFGALFNAEPGFARDGSQFDVLLEDEEGFRIGNLQARALHTPGHTPACMSFMIEDAG-----EIAVFVGDTLFMPDYG-----TARCDFPGA---DARTLYRSIRRLLAFPDQTRLFMCHDY-LPGGRDMQYV--TTVAEQRASNIHIHQGIDEDSFV-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67860 for 1706 contacts (-39.8/contact) +
2D Compatibility (PS) -22658 + (NN) -8424 + (LL) 4652
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -106690.0 ( -62.54 by residue)
QMean score : 0.381
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