Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILA-SLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE |
3O5T Chain:A ((247-274)) | --------------------------------------------------------------------------------------TGAIAGMLAGATYGVETIPPRWLRKLDR----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7527 for 97 contacts (-77.6/contact) +
2D Compatibility (PS) -2609 + (NN) 1695 + (LL) 15492
1D Compatibility (HY) 0 + (ID) 200
Total energy: 6851.0 ( 70.63 by residue)
QMean score : -0.242
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