Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKINRYITRGISEYLSLDLQILLWNMVKERDNQPHTDYLHIFKLQEDENILSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY |
2RDH Chain:A ((13-78)) | --------------------------LSEYYNRPYFDLRNLSGYREGNTVTFINHYQ-QTDVKLEGKDKDKIKDGNNENLDVFVVRE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7 for 317 contacts (0.0/contact) +
2D Compatibility (PS) -6348 + (NN) 1376 + (LL) 3872
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -4393.0 ( -13.86 by residue)
QMean score : 0.144
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