Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------MSVLKWVSSYNNERDAWFVLYPPSKASSCFTLIV-DVALFSE--------------------------------------- |
| 4TSD Chain:A ((2-180)) | AIFGELSSLGHLFKKTQELEILHEYLKEVMQKGSKANQRVLNLATNTEFQVPLGHGIFSIEQSYCLEHAKESEKGFFESHKKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKRD--LIVYEPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREEPIFKAVVKAPKGLIKLKLAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7002 for 139 contacts (-50.4/contact) +
2D Compatibility (PS) -4084 + (NN) -433 + (LL) 300
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -14919.0 ( -107.33 by residue)
QMean score : 0.219
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