Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
1X5K Chain:A ((54-92))
----------------------------YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8675 for 153 contacts (-56.7/contact) +
2D Compatibility (PS) -4087 + (NN) -903 + (LL) 4244
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -12521.0 ( -81.84 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_1X5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X5K-query.scw
PDB file :
Tito_Scwrl_1X5K.pdb
: