Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVSFS-----FNIVQYFLMIASVGVQL-----------YFNRVIAKS------VND-KRQLSQQFWDIFVSKLFLAL------------------TVFAMYMVVITIFIDDYYLI-----FLLQGIYIIGAALDISW-------------FYAGTEKFKIPSLSNIVASGIVLSVVV-----IFVKDQSDLSLYVFTIAIVTVLNQL-PLFIYLKRYISFVSVNWIHV-WQLFRSSL----AYLLPNGQLNLYTSISCVVLGLVGTY-QQVGIF--------SNAFNIL-TVAIIMINTFD---------LVMIPR-ITKMSIQQSHSLTKTLAN------------------NMNIQLILTIPMVFGLIAIMPSFYLWFFGEE--------------------FASTVPLMTILAILVLIIPLNMLISRQ-YL-LIV-NK-IRLYNASITIGAVMNLV-----LCLVLIYFYGIYGAAIARLITEFILLIWRFVDITKI--------------NVKLNIVSTIQCVIAAVMMFIVLG-----VVNHYLPPT-MYATLLLIAIGIVVYLLLMMTMKNQYVWQILRH-LRHKTI----------------------------------------------------- |
| 1D8C Chain:A ((3-722)) | QTITQSRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVETTGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQRKLNDDRHYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -506580 for 3541 contacts (-143.1/contact) +
2D Compatibility (PS) -48612 + (NN) 4554 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 3000
Total energy: -555238.0 ( -156.80 by residue)
QMean score : 0.183
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